Here are some of our software projects and applications.
Maintainers: Camilo Diaz Rodriguez · Ben Knorlein
This project is an effort to integrate data visualization on VR and web browser technologies. It was developed using React-JS and AFrame.
Maintainers: Andrew Leith · Kyle East
This site describes the acquisition and use of the nmrdock docker image containing a variety of tools for analyzing NMR data both from the command line and via GUI. The site contains screenshots and video in addition to the standard narrative documentation..
Maintainers: Ashok Ragavendran
An user-friendly python implementation of a script to download sequence data from Genbank.
Maintainers: Andrew Leith · Fernando Gelin
RefChef is a reference management tool used to: (1) document the exact steps undertaken in the retrieval of genomic references; (2) maintain the associated metadata; (3) provide a mechanism for automatically reproducing retrieval and creation of an exact copy of genomic references.
Maintainers: August Guang
A comprehensive quality control R package for Next Generation Sequencing FASTQ data.
Maintainers: Ashok Ragavendran
A bioinformatics workflow engine that streamlines the most common analysis pipelines. Key features include: 1) Provision of standardized workflows 2) A module for automating SRA downloads and 3) External tools are made available as CONDA packages alongwith the tool.
